| ID | SGR_1761
| Type | CDS
|
| From | 2078179
| nt length | 927
|
| To | 2079105
| aa length | 308
|
| Gene | nei1
| pI | 9.92
|
| Definition | putative endonuclease VIII
| M.W (Da) | 33753
|
| Note |
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_2501 putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity | 337 | 2.0e-93
|
| coel | SCO5760 DNA glycosylase | 359 | 2.0e-100
|
| sam | SAM23877_5464 putative endonuclease 8 2 | 355 | 9.0e-125
|
| kan | CP970_11555 Fpg/Nei family DNA glycosylase | 365 | 2.0e-128
|
| scab | SCAB25041 putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity | 356 | 3.0e-99
|
| sace | SACE_5875 endonuclease VIII | 215 | 5.0e-57
|
| nfar | nfa9770 putative endonuclease VIII | 214 | 1.0e-56
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Fapy_DNA_glyco | 1 | Formamidopyrimidine-DNA glycosylase N-terminal domain | 1-80 | 39.4 | 7.3e-10
|
| H2TH | 1 | Formamidopyrimidine-DNA glycosylase H2TH domain | 124-180 | 34.8 | 1.1e-08
|
| zf-FPG_IleRS | 1 | Zinc finger found in FPG and IleRS | 278-304 | 29.3 | 5.2e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|