-- | --

IDSGR_1766 TypeCDS
From2081764 nt length417
To2081348 aa length138
Gene pI9.39
Definitionconserved hypothetical protein M.W (Da)14861
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2505 putative DNA-binding protein1422.0e-35
coelSCO5755 hypothetical protein1812.0e-47
samSAM23877_5459 Transcriptional regulator ClgR1515.0e-49
kanCP970_11575 XRE family transcriptional regulator1601.0e-52
scabSCAB25071 putative DNA-binding protein1891.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain19-7648.11e-12

HTH_31Helix-turn-helix23-7737.81.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG18595.1 conserved hypothetical protein [Streptomyces griseus subsp. gris... 3685.3e-43
EFF93473.1 helix-turn-helix domain-containing protein [Streptomyces sp. e14] 3424.3e-39
WP_114247014.1 helix-turn-helix transcriptional regulator [Streptomyces atr... 3337.5e-38
WP_028443722.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3292.8e-37
WP_031080794.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3292.8e-37
WP_030757288.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3292.8e-37
WP_018105285.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3293.1e-37
WP_030927058.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 3293.2e-37
WP_189852071.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3293.9e-37
WP_056790924.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3284.1e-37

PSORT result

LocalizationCertaintyPSORT said
Not Clear