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IDSGR_1813 TypeCDS
From2155572 nt length1041
To2154532 aa length346
GenenusA pI5.53
Definitionputative transcriptional termination/antitermination factor M.W (Da)37920
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2553 putative transcriptional termination/antitermination factor5222.0e-149
coelSCO5704 putative transcriptional termination/antitermination factor5652.0e-162
samSAM23877_5425 Transcription termination/antitermination protein NusA5660.0e+00
kanCP970_11820 transcription termination/antitermination protein NusA5800.0e+00
scabSCAB25371 putative transcriptional termination/antitermination factor5631.0e-161
saceSACE_5927 putative transcriptional termination/antitermination factor4031.0e-113
nfarnfa40680 putative transcriptional termination/antitermination factor3961.0e-111

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

KH_51NusA-like KH domain209-27796.37.3e-28

NusA_N1NusA N-terminal domain6-10258.57.4e-16

S11S1 RNA binding domain113-17524.22.9e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965884.1 MULTISPECIES: transcription termination factor NusA [Strepto... 16650.0e+00
WP_219205125.1 transcription termination factor NusA [Streptomyces griseus]... 16640.0e+00
NEB52812.1 transcription termination/antitermination protein NusA [Streptomy... 16620.0e+00
WP_007452815.1 MULTISPECIES: transcription termination factor NusA [Strepto... 16580.0e+00
WP_069757740.1 transcription termination factor NusA [Streptomyces sp. EN16... 16540.0e+00
WP_047179096.1 MULTISPECIES: transcription termination factor NusA [unclass... 16530.0e+00
WP_097872049.1 transcription termination factor NusA [Streptomyces sp. rh34... 16530.0e+00
WP_073882364.1 MULTISPECIES: transcription termination factor NusA [unclass... 16490.0e+00
WP_018509555.1 MULTISPECIES: transcription termination factor NusA [unclass... 16470.0e+00
WP_124264960.1 transcription termination factor NusA [Streptomyces sp. ADI9... 16450.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear