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IDSGR_1821 TypeCDS
From2162948 nt length1158
To2161791 aa length385
GenegcpE pI5.31
Definitionputative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase M.W (Da)40358
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2561 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6540.0e+00
coelSCO5696 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7060.0e+00
samSAM23877_5417 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 27070.0e+00
kanCP970_11855 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase7370.0e+00
scabSCAB25451 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7140.0e+00
saceSACE_5992 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6091.0e-175
nfarnfa41180 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6420.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GcpE1GcpE protein22-361444.22.8e-133

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965892.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 20020.0e+00
WP_205082392.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 20010.0e+00
WP_030629615.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 20000.0e+00
WP_032789231.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 20000.0e+00
WP_026241002.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 19990.0e+00
WP_056704289.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 19980.0e+00
WP_032792501.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 19980.0e+00
WP_026291012.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 19980.0e+00
WP_015611807.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 19970.0e+00
WP_073213717.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 19970.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear