| ID | SGR_1823
| Type | CDS
|
| From | 2165688
| nt length | 1263
|
| To | 2164426
| aa length | 420
|
| Gene | dxr
| pI | 5.01
|
| Definition | putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase
| M.W (Da) | 43567
|
| Note |
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_2563 putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 618 | 4.0e-178
|
| coel | SCO5694 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 684 | 0.0e+00
|
| sam | SAM23877_5415 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 694 | 0.0e+00
|
| kan | CP970_11865 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 726 | 0.0e+00
|
| scab | SCAB25481 putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 714 | 0.0e+00
|
| sace | SACE_5994 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 425 | 5.0e-120
|
| nfar | nfa41200 putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 369 | 3.0e-103
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DXP_reductoisom | 1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 27-159 | 134.3 | 3.5e-39
|
| DXP_redisom_C | 1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal | 171-254 | 124.3 | 1.6e-36
|
| DXPR_C | 1 | DXP reductoisomerase C-terminal domain | 288-405 | 107.6 | 3.8e-31
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_012378799.1 | MULTISPECIES: 1-deoxy-D-xylulose-5-phosphate reductoisomeras...
| 1959 | 0.0e+00 |
| WP_003965894.1 | MULTISPECIES: 1-deoxy-D-xylulose-5-phosphate reductoisomeras...
| 1952 | 0.0e+00 |
|
| 1940 | 0.0e+00 |
| MYR49490.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Streptomyces sp....
| 1935 | 0.0e+00 |
| WP_219612468.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Streptomyce...
| 1933 | 0.0e+00 |
| WP_179888690.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Streptomyce...
| 1929 | 0.0e+00 |
| WP_179892935.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Streptomyce...
| 1928 | 0.0e+00 |
| WP_179890687.1 | MULTISPECIES: 1-deoxy-D-xylulose-5-phosphate reductoisomeras...
| 1927 | 0.0e+00 |
| WP_176739614.1 | MULTISPECIES: 1-deoxy-D-xylulose-5-phosphate reductoisomeras...
| 1926 | 0.0e+00 |
| WP_217230876.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Streptomyce...
| 1925 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|