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IDSGR_1844 TypeCDS
From2193550 nt length1188
To2192363 aa length395
Gene pI5.02
Definitionputative polyamine ABC transporter substrate-binding protein M.W (Da)44003
Note AseI frg.A
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2609 putative ABC transporter solute-binding protein6540.0e+00
coelSCO5658 putative polyamine-binding lipoprotein6370.0e+00
samSAM23877_5387 Polyamine-binding lipoprotein6210.0e+00
kanCP970_11995 extracellular solute-binding protein6550.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_81Bacterial extracellular solute-binding protein77-34991.66.6e-26

SBP_bac_61Bacterial extracellular solute-binding protein116-35075.15.2e-21

SBP_bac_11Bacterial extracellular solute-binding protein74-32434.61.8e-08

TAT_signal1TAT (twin-arginine translocation) pathway signal sequence9-3125.47.5e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG18673.1 putative polyamine ABC transporter substrate-binding protein [St... 20140.0e+00
WP_030704926.1 extracellular solute-binding protein [Streptomyces griseus] 19740.0e+00
WP_003965917.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19720.0e+00
WP_164363764.1 spermidine/putrescine ABC transporter substrate-binding prot... 19700.0e+00
EFE77968.1 ABC transporter solute-binding protein [Streptomyces filamentosus... 19670.0e+00
WP_032789209.1 spermidine/putrescine ABC transporter substrate-binding prot... 19530.0e+00
WP_044372091.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19470.0e+00
WP_200739551.1 spermidine/putrescine ABC transporter substrate-binding prot... 19440.0e+00
WP_200721442.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19440.0e+00
WP_010061926.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19420.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear