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IDSGR_1990 TypeCDS
From2348514 nt length1164
To2349677 aa length387
Gene pI6.32
Definitionputative transcriptional regulator M.W (Da)40339
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2725 putative transcriptional regulator4162.0e-117
coelSCO5518 putative transcriptional regulator4311.0e-121
samSAM23877_5268 putative transcriptional regulator4391.0e-154
kanCP970_12705 PucR family transcriptional regulator4594.0e-162
scabSCAB27011 putative transcriptional regulator4687.0e-133

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain326-38378.12.8e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EGE41587.1 putative transcriptional regulator, PucR family [Streptomyces sp.... 14280.0e+00
WP_202463224.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 14220.0e+00
WP_030705632.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13940.0e+00
WP_217226560.1 helix-turn-helix domain-containing protein [Streptomyces anu... 13430.0e+00
GHF41281.1 transcriptional regulator [Streptomyces griseus] 13430.0e+00
GGR96032.1 transcriptional regulator [Streptomyces rubiginosohelvolus] 13410.0e+00
WP_073866127.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13380.0e+00
WP_050362398.1 helix-turn-helix domain-containing protein [Streptomyces eur... 13380.0e+00
WP_203685337.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13380.0e+00
WP_073957597.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13380.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear