SGR_2142

ID SGR_2142 Type CDS
From 2542441 nt length 1011
To 2543451 aa length 336
Gene pI 6.09
Definition putative ABC transporter ATP-binding protein M.W (Da) 36254
Note AseI frg. A
SignalP v.4.0 Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_2860 putative ABC transporter ATP-binding protein	480	1.0e-136
coel	SCO5395 putative ABC transporter ATP-binding subunit	494	6.0e-141
sam	SAM23877_5142 ABC transporter ATP-binding subunit	494	4.0e-178
kan	CP970_13535 ABC transporter ATP-binding protein	518	0.0e+00
scab	SCAB28531	467	9.0e-133
sace	SACE_7260 putative ABC transporter ATP-binding subunit	388	5.0e-109
nfar	nfa53360 putative ABC transporter ATP-binding protein	356	2.0e-99

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

ABC_tran 1 ABC transporter 18-156 84.5 8.3e-24

AAA_21 1 AAA domain, putative AbiEii toxin, Type IV TA system 128-185 46.3 4.4e-12

BLAST search result (top 10 hits)

ID Description Score E-value
WP_012379004.1 MULTISPECIES: ABC transporter ATP-binding protein [Streptomy... 1778 0.0e+00
WP_003966228.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassif... 1771 0.0e+00
WP_161183968.1 ATP-binding cassette domain-containing protein [Streptomyces... 1768 0.0e+00
WP_030702724.1 MULTISPECIES: ABC transporter ATP-binding protein [Streptomy... 1753 0.0e+00
WP_097936238.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassif... 1710 0.0e+00
WP_073866227.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassif... 1709 0.0e+00
WP_007449817.1 MULTISPECIES: ABC transporter ATP-binding protein [Streptomy... 1704 0.0e+00
WP_087764913.1 ABC transporter ATP-binding protein [Streptomyces sp. CS057]... 1701 0.0e+00
WP_073802687.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassif... 1701 0.0e+00
WP_050360380.1 ABC transporter ATP-binding protein [Streptomyces europaeisc... 1699 0.0e+00

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SGR_2142	Type	CDS
From	2542441	nt length	1011
To	2543451	aa length	336
Gene		pI	6.09
Definition	putative ABC transporter ATP-binding protein	M.W (Da)	36254
Note		AseI frg.	A
SignalP v.4.0	Non-secretory protein \| plot	Category

Model	No.	Description	Position (aa)	Score	E-value
ABC_tran	1	ABC transporter	18-156	84.5	8.3e-24
AAA_21	1	AAA domain, putative AbiEii toxin, Type IV TA system	128-185	46.3	4.4e-12