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IDSGR_2183 TypeCDS
From2586890 nt length1392
To2585499 aa length463
GenelysA1 pI5.01
Definitionputative diaminopimelate decarboxylase M.W (Da)50009
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2919 putative diaminopimelate decarboxylase7940.0e+00
coelSCO5353 lysA diaminopimelate decarboxylase8270.0e+00
samSAM23877_5097 Diaminopimelate decarboxylase8330.0e+00
kanCP970_13745 diaminopimelate decarboxylase8390.0e+00
scabSCAB28971 putative diaminopimelate decarboxylase7990.0e+00
saceSACE_6299 diaminopimelate decarboxylase5717.0e-164
nfarnfa10480 putative diaminopimelate decarboxylase4961.0e-141

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain71-323219.05.8e-65

Orn_DAP_Arg_deC1Pyridoxal-dependent decarboxylase, C-terminal sheet domain320-43857.89.1e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003966270.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 24060.0e+00
WP_215111580.1 diaminopimelate decarboxylase [Streptomyces sp. McG3] >lcl 23880.0e+00
WP_098892657.1 diaminopimelate decarboxylase [Streptomyces sp. or3] 23840.0e+00
WP_057665799.1 diaminopimelate decarboxylase [Streptomyces anulatus] >gb 23820.0e+00
WP_047178818.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 23820.0e+00
WP_073802667.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 23810.0e+00
WP_050360404.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 23800.0e+00
WP_217226491.1 diaminopimelate decarboxylase [Streptomyces anulatus] 23790.0e+00
WP_097922880.1 diaminopimelate decarboxylase [Streptomyces sp. wa1063] 23780.0e+00
WP_097963963.1 MULTISPECIES: diaminopimelate decarboxylase [Streptomyces] >... 23770.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear