-- | --

IDSGR_2196 TypeCDS
From2605500 nt length891
To2606390 aa length296
GeneligD pI5.68
Definitionconserved hypothetical protein M.W (Da)31957
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2946 putative DNA ligase3992.0e-112
coelSCO5308 hypothetical protein4053.0e-114
samSAM23877_5081 DNA polymerase LigD%2C polymerase domain-containing protein4052.0e-144
kanCP970_13915 ATP-dependent DNA ligase4413.0e-158
scabSCAB29521 putative DNA ligase4049.0e-114
saceSACE_3549 DNA ligase (ATP)2555.0e-69
nfarnfa6770 putative ATP-dependent DNA ligase1884.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379040.1 MULTISPECIES: non-homologous end-joining DNA ligase [Strepto... 15430.0e+00
WP_003966282.1 MULTISPECIES: non-homologous end-joining DNA ligase [Strepto... 15360.0e+00
WP_215106597.1 non-homologous end-joining DNA ligase [Streptomyces sp. McG3... 14650.0e+00
WP_097963952.1 non-homologous end-joining DNA ligase [Streptomyces sp. or20... 14580.0e+00
WP_219612235.1 non-homologous end-joining DNA ligase [Streptomyces anulatus... 14540.0e+00
WP_073802644.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 14540.0e+00
WP_210932136.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 14530.0e+00
WP_056700576.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 14520.0e+00
WP_097935011.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 14520.0e+00
WP_214299005.1 non-homologous end-joining DNA ligase [Streptomyces sp. Tu10... 14510.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear