| ID | SGR_2342
| Type | CDS
|
| From | 2769209
| nt length | 3555
|
| To | 2765655
| aa length | 1184
|
| Gene | uvrD2
| pI | 5.52
|
| Definition | putative ATP-dependent DNA helicase
| M.W (Da) | 126897
|
| Note |
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_3077 putative ATP-dependent DNA helicase | 1533 | 0.0e+00
|
| coel | SCO5183 putative ATP-dependent DNA helicase | 1723 | 0.0e+00
|
| sam | SAM23877_4966 ATP-dependent DNA helicase | 1748 | 0.0e+00
|
| kan | CP970_14655 hypothetical protein | 1728 | 0.0e+00
|
| scab | SCAB30771 putative ATP-dependent DNA helicase | 1647 | 0.0e+00
|
| sace | SACE_1077 possible ATP-dependent DNA helicase | 468 | 1.0e-132
|
| nfar | nfa45390 putative helicase | 251 | 3.0e-67
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UvrD-helicase | 2 | UvrD/REP helicase N-terminal domain | 39-285, 326-359 | 158.5 | 2.6e-46
|
| PDDEXK_1 | 1 | PD-(D/E)XK nuclease superfamily | 920-1173 | 136.8 | 1.1e-39
|
| AAA_19 | 1 | AAA domain | 41-286 | 95.9 | 2.4e-27
|
| UvrD_C | 1 | UvrD-like helicase C-terminal domain | 685-815 | 87.1 | 1.3e-24
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|