| ID | SGR_2359
| Type | CDS
|
| From | 2788991
| nt length | 2196
|
| To | 2791186
| aa length | 731
|
| Gene | rhlE
| pI | 10.38
|
| Definition | putative ATP-dependent RNA helicase
| M.W (Da) | 77451
|
| Note |
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_3098 putative ATP-dependent RNA helicase | 597 | 1.0e-171
|
| coel | SCO5166 putative helicase | 759 | 0.0e+00
|
| sam | SAM23877_4947 putative helicase | 766 | 0.0e+00
|
| kan | CP970_14795 DEAD/DEAH box helicase | 766 | 0.0e+00
|
| scab | SCAB30971 putative ATP-dependent RNA helicase | 770 | 0.0e+00
|
| sace | SACE_1060 putative ATP-dependent RNA helicase | 524 | 2.0e-149
|
| nfar | nfa45730 putative ATP-dependent RNA helicase | 508 | 9.0e-145
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DEAD | 1 | DEAD/DEAH box helicase | 2-171 | 163.5 | 3.5e-48
|
| Helicase_C | 1 | Helicase conserved C-terminal domain | 212-321 | 104.5 | 3.5e-30
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|