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IDSGR_2472 TypeCDS
From2915249 nt length990
To2914260 aa length329
GeneispH pI4.51
Definitionputative 4-hydroxy-3-methylbut-2-enyl diphosphate M.W (Da)35278
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3210 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase5084.0e-145
coelSCO5058 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase5661.0e-162
samSAM23877_4856 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase%2C 4Fe-4S protein5580.0e+00
kanCP970_15335 4-hydroxy-3-methylbut-2-enyl diphosphate reductase6110.0e+00
scabSCAB33471 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase5608.0e-161
saceSACE_0939 4-hydroxy-3-methylbut-2-enyl diphosphate reductase4722.0e-134
nfarnfa47950 putative isoprenoid biosynthesis protein4752.0e-135

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LYTB1LytB protein12-289291.64.4e-87

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379224.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 16350.0e+00
WP_003966588.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 16310.0e+00
WP_199809132.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16300.0e+00
WP_170757409.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 16280.0e+00
WP_179181599.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16270.0e+00
WP_073764331.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 16260.0e+00
WP_199810055.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16210.0e+00
WP_199814144.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 16210.0e+00
WP_176711541.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16210.0e+00
WP_179887785.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear