| ID | SGR_2650
| Type | CDS
|
| From | 3133849
| nt length | 429
|
| To | 3133421
| aa length | 142
|
| Gene | cdd2
| pI | 4.63
|
| Definition | putative cytidine deaminase
| M.W (Da) | 14690
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_3366 putative cytidine/deoxycytidine deaminase | 198 | 2.0e-52
|
| coel | SCO4889 putative cytidine deaminase | 213 | 7.0e-57
|
| sam | SAM23877_4711 Cytidine deaminase | 200 | 2.0e-68
|
| kan | CP970_16180 cytidine deaminase | 207 | 7.0e-71
|
| scab | SCAB34931 putative cytidine/deoxycytidine deaminase | 205 | 2.0e-54
|
| sace | SACE_6576 cytidine deaminase | 147 | 5.0e-37
|
| nfar | nfa9500 putative cytidine deaminase | 131 | 2.0e-32
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| dCMP_cyt_deam_2 | 1 | Cytidine and deoxycytidylate deaminase zinc-binding region | 20-70 | 43.8 | 2.5e-11
|
| dCMP_cyt_deam_1 | 1 | Cytidine and deoxycytidylate deaminase zinc-binding region | 22-116 | 36.9 | 2.3e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|