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IDSGR_2671 TypeCDS
From3159134 nt length621
To3159754 aa length206
Gene pI9.73
Definitionhypothetical protein M.W (Da)22857
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3383 putative lipoprotein2713.0e-74
coelSCO4868 putative lipoprotein2677.0e-73
samSAM23877_4686 putative lipoprotein2753.0e-94
kanCP970_16360 murein L%2CD-transpeptidase2896.0e-100
scabSCAB35161 putative lipoprotein2762.0e-75

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain93-20462.07.3e-17

PG_binding_11Putative peptidoglycan binding domain8-6256.32.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_106731631.1 MULTISPECIES: L,D-transpeptidase family protein [Streptomyce... 11171.6e-153
WP_176737609.1 L,D-transpeptidase family protein, partial [Streptomyces gri... 11087.6e-153
WP_202465319.1 MULTISPECIES: L,D-transpeptidase family protein, partial [St... 11061.5e-152
WP_176726487.1 L,D-transpeptidase family protein, partial [Streptomyces sp.... 11042.3e-152
EGE42267.1 ErfK/YbiS/YcfS/YnhG family protein [Streptomyces sp. ACT-1] 11142.4e-152
BAG19500.1 hypothetical protein SGR_2671 [Streptomyces griseus subsp. grise... 11002.6e-152
WP_075025233.1 MULTISPECIES: L,D-transpeptidase family protein [Streptomyce... 11133.2e-152
WP_093684189.1 MULTISPECIES: L,D-transpeptidase family protein [unclassifie... 11124.6e-152
WP_219205404.1 L,D-transpeptidase family protein [Streptomyces griseus] >lc... 10961.0e-151
EHM24647.1 hypothetical protein SPW_6996 [Streptomyces sp. W007] 10733.9e-147

PSORT result

LocalizationCertaintyPSORT said
Not Clear