| ID | SGR_2733
| Type | CDS
|
| From | 3235529
| nt length | 2442
|
| To | 3233088
| aa length | 813
|
| Gene | uvrD1
| pI | 4.97
|
| Definition | putative ATP-dependent DNA helicase
| M.W (Da) | 89411
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_3463 putative ATP-dependent DNA helicase | 1291 | 0.0e+00
|
| coel | SCO4797 putative ATP-dependent DNA helicase II | 1369 | 0.0e+00
|
| sam | SAM23877_4613 ATP-dependent DNA helicase UvrD1 | 1378 | 0.0e+00
|
| kan | CP970_16820 DNA helicase PcrA | 1363 | 0.0e+00
|
| scab | SCAB35921 putative ATP-dependent DNA helicase | 1344 | 0.0e+00
|
| sace | SACE_6681 putative ATP-dependent DNA helicase | 686 | 0.0e+00
|
| nfar | nfa49950 putative ATP-dependent DNA helicase | 870 | 0.0e+00
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UvrD-helicase | 1 | UvrD/REP helicase N-terminal domain | 70-338 | 263.6 | 2.6e-78
|
| UvrD_C | 1 | UvrD-like helicase C-terminal domain | 344-687 | 232.5 | 8.3e-69
|
| AAA_19 | 1 | AAA domain | 74-324 | 128.4 | 2.3e-37
|
| UvrD_C_2 | 1 | UvrD-like helicase C-terminal domain | 629-686 | 47.7 | 8.7e-13
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|