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IDSGR_3012 TypeCDS
From3515062 nt length2925
To3517986 aa length974
GeneafsR-g pI5.31
Definitiontranscriptional regulator M.W (Da)104343
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3804 putative transcriptional regulator10840.0e+00
coelSCO4426 afsR regulatory protein12080.0e+00
samSAM23877_3308 Regulatory protein AfsR11790.0e+00
kanCP970_24765 AfsR/SARP family transcriptional regulator12300.0e+00
scabSCAB51941 11890.0e+00
nfarnfa53810 putative transcriptional regulator1504.0e-37

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BTAD1Bacterial transcriptional activator domain119-263141.03.4e-41

NB-ARC1NB-ARC domain304-50052.53.2e-14

TPR_121Tetratricopeptide repeat777-84548.76.4e-13

Trans_reg_C1Transcriptional regulatory protein, C terminal47-10235.47.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379580.1 MULTISPECIES: tetratricopeptide repeat protein [Streptomyces... 40740.0e+00
WP_219205532.1 tetratricopeptide repeat protein [Streptomyces griseus] >lcl... 40650.0e+00
Q9S0Y6.1 RecName: Full=Regulatory protein AfsR [Streptomyces griseus] >dbj 40620.0e+00
WP_161185487.1 MULTISPECIES: tetratricopeptide repeat protein [Streptomyces... 40440.0e+00
WP_003967112.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 40390.0e+00
WP_093684103.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 40380.0e+00
WP_030702251.1 tetratricopeptide repeat protein [Streptomyces griseus] 40250.0e+00
WP_159402305.1 tetratricopeptide repeat protein [Streptomyces griseus] 40140.0e+00
WP_098898672.1 tetratricopeptide repeat protein [Streptomyces sp. st77] 38560.0e+00
WP_088577343.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 38560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear