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IDSGR_3079 TypeCDS
From3589776 nt length633
To3590408 aa length210
Gene pI8.08
Definitionputative transcriptional regulator M.W (Da)22867
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5095 ORF9 putative DNA-binding protein2362.0e-63

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain26-8461.75.8e-17

HTH_31Helix-turn-helix30-8454.86.5e-15

Cupin_21Cupin domain122-18948.35.4e-13

HTH_191Helix-turn-helix domain28-8545.36.1e-12

HTH_261Cro/C1-type HTH DNA-binding domain29-8434.12.4e-08

AraC_binding1AraC-like ligand binding domain134-19322.67.2e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003967179.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9841.8e-134
WP_093563703.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9842.6e-134
WP_030702198.1 helix-turn-helix domain-containing protein [Streptomyces gri... 9809.9e-134
WP_164362147.1 helix-turn-helix domain-containing protein [Streptomyces gri... 9755.3e-133
WP_217229081.1 helix-turn-helix domain-containing protein [Streptomyces anu... 9312.6e-126
WP_069752473.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9285.8e-126
WP_215110071.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9278.3e-126
WP_210934657.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9271.1e-125
WP_097911971.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9182.0e-124
WP_073866795.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9173.6e-124

PSORT result

LocalizationCertaintyPSORT said
Not Clear