ID	SGR_3223	Type	CDS
From	3743607	nt length	528
To	3743080	aa length	175
Gene	sig39	pI	10.04
Definition	putative RNA polymerase ECF-subfamily sigma factor	M.W (Da)	19842
Note		AseI frg.	E
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	110-160	55.5	3e-15
	Sigma70_r2	1	Sigma-70 region 2	19-85	47.3	1.2e-12
	Sigma70_r4	1	Sigma-70, region 4	113-160	40.3	1.5e-10

BLAST search result (top 10 hits)

ID	Description	Score	E-value
BAG20052.1	putative RNA polymerase ECF-subfamily sigma factor [Streptomyces...	902	3.7e-123
GGY60533.1	RNA polymerase sigma24 factor [Streptomyces anulatus]	868	6.3e-118
EHM25471.1	RNA polymerase ECF-subfamily sigma factor [Streptomyces sp. W007]	865	1.7e-117
WP_030704621.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >lc...	856	3.3e-116
WP_003967343.1	MULTISPECIES: RNA polymerase sigma factor [unclassified Stre...	849	3.7e-115
EFE76498.1	ECF sigma factor [Streptomyces filamentosus NRRL 15998] >gb	839	1.4e-113
OCC09050.1	ECF RNA polymerase sigma factor SigW [Streptomyces sp. PTY087I2] ...	837	3.3e-113
WP_073740701.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	835	4.6e-113
WP_164259174.1	RNA polymerase sigma factor [Streptomyces anulatus] >gb	833	9.2e-113
GGS16655.1	RNA polymerase sigma24 factor [Streptomyces parvus] >emb	835	1.2e-112

PSORT result

Localization	Certainty	PSORT said
Not Clear

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