-- | --

IDSGR_3301 TypeCDS
From3874971 nt length2892
To3872080 aa length963
GenetopA pI9.29
Definitionputative DNA topoisomerase I M.W (Da)104226
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4621 putative DNA topoisomerase I14790.0e+00
coelSCO3543 probable DNA topoisomerase I16020.0e+00
samSAM23877_4123 DNA topoisomerase 116290.0e+00
kanCP970_19575 type I DNA topoisomerase16520.0e+00
scabSCAB40781 putative DNA topoisomerase I16260.0e+00
saceSACE_0377 DNA topoisomerase I10900.0e+00
nfarnfa3670 putative DNA topoisomerase I10990.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase149-593433.38.3e-130

Toprim_C_rpt4Topoisomerase C-terminal repeat647-698, 706-770, 776-826, 839-891208.56.1e-63

Toprim1Toprim domain14-13494.43.7e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003967422.1 MULTISPECIES: type I DNA topoisomerase [unclassified Strepto... 43540.0e+00
WP_012379792.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >lcl 43520.0e+00
WP_164364288.1 type I DNA topoisomerase [Streptomyces griseus] >gb 43480.0e+00
WP_093563886.1 type I DNA topoisomerase [Streptomyces sp. OspMP-M43] >emb 43480.0e+00
WP_161185459.1 type I DNA topoisomerase [Streptomyces sp. SID724] >gb 43470.0e+00
WP_218785966.1 type I DNA topoisomerase [Streptomyces sp. WY228] >gb 43400.0e+00
WP_030087088.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] 43380.0e+00
WP_086777246.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >dbj 43360.0e+00
WP_030633085.1 type I DNA topoisomerase [Streptomyces albus] 43350.0e+00
WP_087765551.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >gb 43340.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear