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IDSGR_3308 TypeCDS
From3882876 nt length2325
To3885200 aa length774
Gene pI6.63
Definitionputative ATP-dependent RNA helicase M.W (Da)83253
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4613 putative ATP-dependent RNA helicase12810.0e+00
coelSCO3550 putative helicase13470.0e+00
samSAM23877_4116 putative helicase12670.0e+00
kanCP970_19610 DEAD/DEAH box helicase13750.0e+00
scabSCAB40871 putative ATP-dependent RNA helicase13850.0e+00
saceSACE_0373 DEAD/DEAH box helicase-like8250.0e+00
nfarnfa3650 putative ATP-dependent RNA helicase7860.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase54-22988.05.6e-25

DUF19981Domain of unknown function (DUF1998)659-73873.81.3e-20

Helicase_C1Helicase conserved C-terminal domain290-39846.14.7e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_075025225.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 36500.0e+00
BAG20137.1 putative ATP-dependent RNA helicase [Streptomyces griseus subsp.... 36500.0e+00
SEE83227.1 DEAD/DEAH box helicase domain-containing protein [Streptomyces g... 36480.0e+00
WP_161185464.1 DEAD/DEAH box helicase [Streptomyces sp. SID724] >gb 36460.0e+00
WP_003967429.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 36440.0e+00
WP_219205769.1 DEAD/DEAH box helicase [Streptomyces griseus] >lcl 36420.0e+00
WP_093683230.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 36420.0e+00
SBU92818.1 DEAD/DEAH box helicase domain-containing protein [Streptomyces s... 36400.0e+00
WP_164618510.1 DEAD/DEAH box helicase [Streptomyces sp. SID14515] >gb 35350.0e+00
WP_098023481.1 DEAD/DEAH box helicase [Streptomyces sp. st115] 35290.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear