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IDSGR_3426 TypeCDS
From4015793 nt length2586
To4013208 aa length861
GeneclpB pI4.72
Definitionputative ATP-dependent protease subunit M.W (Da)93804
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4514 putative ATP-dependent Clp protease12740.0e+00
coelSCO3661 clpB putative ATP-dependent protease ATP-binding subunit14610.0e+00
samSAM23877_3960 protein disaggregation chaperone14710.0e+00
kanCP970_20420 ATP-dependent chaperone ClpB14840.0e+00
scabSCAB42291 putative ATP-dependent Clp protease14050.0e+00
saceSACE_7199 putative Clp protease ATP-binding subunit11350.0e+00
nfarnfa54020 putative Clp protease ATP-binding subunit11000.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)600-761180.23.2e-53

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein768-84892.11.5e-26

AAA2ATPase family associated with various cellular activities (AAA)204-338, 606-72481.75.7e-23

Clp_N2Clp amino terminal domain, pathogenicity island component18-69, 95-14661.84.6e-17

AAA_51AAA domain (dynein-related subfamily)605-72361.38.7e-17

Sigma54_activat1Sigma-54 interaction domain576-70537.41.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003967569.1 MULTISPECIES: ATP-dependent chaperone ClpB [Streptomyces] >g... 41450.0e+00
WP_093562988.1 ATP-dependent chaperone ClpB [Streptomyces sp. OspMP-M43] >e... 41380.0e+00
WP_202463603.1 MULTISPECIES: ATP-dependent chaperone ClpB [Streptomyces] 41230.0e+00
WP_215109765.1 ATP-dependent chaperone ClpB [Streptomyces sp. McG3] >lcl 40920.0e+00
WP_097931930.1 MULTISPECIES: ATP-dependent chaperone ClpB [unclassified Str... 40890.0e+00
NED00965.1 ATP-dependent chaperone ClpB [Streptomyces sp. SID6648] 40840.0e+00
WP_190006594.1 ATP-dependent chaperone ClpB [Streptomyces anulatus] >dbj 40800.0e+00
WP_050358445.1 MULTISPECIES: ATP-dependent chaperone ClpB [Streptomyces] >g... 40790.0e+00
WP_007452892.1 ATP-dependent chaperone ClpB [Streptomyces sp. W007] >gb 40780.0e+00
NDZ56344.1 ATP-dependent chaperone ClpB [Streptomyces anulatus] >gb 40760.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear