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IDSGR_3659 TypeCDS
From4278237 nt length378
To4278614 aa length125
Gene pI7.55
Definitionputative membrane protein M.W (Da)13248
Note AseI frg.M
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4271 putative membrane protein1513.0e-38
coelSCO3922 putative membrane protein1912.0e-50
samSAM23877_3733 conserved membrane protein of unknown function1959.0e-67
kanCP970_21670 phage holin family protein1708.0e-57
scabSCAB46271 hypothetical protein1835.0e-48

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Phage_holin_4_21Mycobacterial 4 TMS phage holin, superfamily IV3-115102.21.9e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003967845.1 MULTISPECIES: phage holin family protein [Streptomyces] >gb 5981.9e-78
WP_007453829.1 MULTISPECIES: phage holin family protein [Streptomyces] >gb 5973.1e-78
WP_217221854.1 phage holin family protein [Streptomyces anulatus] 5931.1e-77
WP_050359875.1 phage holin family protein [Streptomyces europaeiscabiei] >g... 5921.6e-77
WP_215101190.1 phage holin family protein [Streptomyces sp. McG3] >lcl 5922.0e-77
WP_030576059.1 MULTISPECIES: phage holin family protein [Streptomyces] >gb 5861.5e-76
WP_164612374.1 phage holin family protein [Streptomyces sp. SID14515] >gb 5842.4e-76
WP_030077304.1 MULTISPECIES: phage holin family protein [Streptomyces] >lcl... 5833.5e-76
WP_015609879.1 MULTISPECIES: phage holin family protein [Streptomyces] >lcl... 5782.0e-75
WP_030707384.1 MULTISPECIES: phage holin family protein [Streptomyces] >gb 5782.1e-75

PSORT result

LocalizationCertaintyPSORT said
Not Clear