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IDSGR_3884 TypeCDS
From4553976 nt length3933
To4550044 aa length1310
GenehrpA pI8.07
Definitionputative ATP-dependent helicase M.W (Da)148611
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4128 putative ATP-dependent helicase21530.0e+00
coelSCO4092 ATP-dependent helicase22720.0e+00
samSAM23877_3588 ATP-dependent helicase22440.0e+00
kanCP970_22635 ATP-dependent RNA helicase HrpA22710.0e+00
scabSCAB47921 putative ATP-dependent helicase22570.0e+00
saceSACE_6203 ATP-dependent helicase16770.0e+00
nfarnfa37970 putative ATP-dependent helicase13950.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF34181Domain of unknown function (DUF3418)715-1306771.74.6e-232

HA21Helicase associated domain (HA2)464-55569.81.9e-19

OB_NTP_bind1Oligonucleotide/oligosaccharide-binding (OB)-fold616-70157.98.5e-16

Helicase_C1Helicase conserved C-terminal domain284-40142.27.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380212.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 66650.0e+00
WP_161186378.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 66620.0e+00
WP_003968049.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [unclassified ... 66590.0e+00
WP_030701513.1 ATP-dependent RNA helicase HrpA [Streptomyces griseus] 66570.0e+00
WP_219205958.1 ATP-dependent RNA helicase HrpA [Streptomyces griseus] >lcl 66560.0e+00
WP_093563058.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. OspMP-M43]... 66530.0e+00
WP_093685198.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [unclassified ... 66480.0e+00
WP_164217137.1 ATP-dependent RNA helicase HrpA [Streptomyces anulatus] >gb 66230.0e+00
WP_047177468.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. MNU77] >gb... 66220.0e+00
WP_030707685.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 66180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear