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IDSGR_3948 TypeCDS
From4639721 nt length852
To4640572 aa length283
Gene pI6.89
Definitionputative DNA-binding protein M.W (Da)31444
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2798 putative DNA-binding protein2741.0e-74
coelSCO4543 hypothetical protein2702.0e-73
samSAM23877_5234 DNA-binding protein1999.0e-64
kanCP970_23095 XRE family transcriptional regulator2962.0e-101
scabSCAB58741 putative DNA-binding protein2463.0e-66

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain14-7030.92.3e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380258.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13390.0e+00
WP_093684252.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13330.0e+00
WP_219205983.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13330.0e+00
WP_215111206.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13002.6e-180
WP_097957508.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 12961.4e-179
WP_098007994.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12534.0e-173
WP_015610194.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11921.0e-163
WP_026241307.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 11875.6e-163
WP_176144210.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11771.5e-161
WP_161265409.1 Scr1 family TA system antitoxin-like transcriptional regulat... 11753.6e-161

PSORT result

LocalizationCertaintyPSORT said
Not Clear