SGR_4020

ID SGR_4020 Type CDS
From 4705396 nt length 957
To 4706352 aa length 318
Gene pI 10.43
Definition putative tRNA/rRNA methyltransferase M.W (Da) 33651
Note AseI frg. D
SignalP v.4.0 Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_3966 putative tRNA/rRNA methyltransferase	451	8.0e-128
coel	SCO4236 putative tRNA/rRNA methyltransferase	514	5.0e-147
sam	SAM23877_3464 putative tRNA/rRNA methyltransferase	501	0.0e+00
kan	CP970_23655 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	511	0.0e+00
scab	SCAB50121 putative tRNA/rRNA methyltransferase	523	2.0e-149
sace	SACE_0444 tRNA/rRNA methyltransferase	342	3.0e-95
nfar	nfa4390 putative tRNA/rRNA methyltransferase	326	2.0e-90

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

SpoU_methylase 1 SpoU rRNA Methylase family 170-311 110.8 5.2e-32

SpoU_sub_bind 1 RNA 2'-O ribose methyltransferase substrate binding 77-153 66.7 1.5e-18

BLAST search result (top 10 hits)

ID Description Score E-value
WP_003968193.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 1476 0.0e+00
WP_164616698.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 1476 0.0e+00
NYS19153.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Streptomy... 1472 0.0e+00
WP_217230152.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 1472 0.0e+00
WP_093692710.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 1472 0.0e+00
WP_073806096.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 1469 0.0e+00
WP_073877001.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 1469 0.0e+00
WP_201107134.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 1468 0.0e+00
WP_205085692.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Stre... 1468 0.0e+00
WP_007446476.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransfer... 1467 0.0e+00

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SGR_4020	Type	CDS
From	4705396	nt length	957
To	4706352	aa length	318
Gene		pI	10.43
Definition	putative tRNA/rRNA methyltransferase	M.W (Da)	33651
Note		AseI frg.	D
SignalP v.4.0	Non-secretory protein \| plot	Category

Model	No.	Description	Position (aa)	Score	E-value
SpoU_methylase	1	SpoU rRNA Methylase family	170-311	110.8	5.2e-32
SpoU_sub_bind	1	RNA 2'-O ribose methyltransferase substrate binding	77-153	66.7	1.5e-18