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IDSGR_4257 TypeCDS
From4981642 nt length858
To4980785 aa length285
Gene pI6
Definitionputative DNA-binding protein M.W (Da)32426
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3783 putative DNA-binding protein4746.0e-135
coelSCO4441 putative DNA-binding protein4813.0e-137
samSAM23877_3287 Chitinase promoter binding protein 14912.0e-178
kanCP970_24895 XRE family transcriptional regulator5200.0e+00
scabSCAB52291 5085.0e-145
saceSACE_1219 transcriptional regulator, XRE family2062.0e-54

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-7062.04.6e-17

HTH_31Helix-turn-helix18-6745.65e-12

HTH_191Helix-turn-helix domain15-6843.03.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968449.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14110.0e+00
WP_215106621.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14040.0e+00
WP_010064569.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14030.0e+00
WP_030803670.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14000.0e+00
WP_065487167.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13990.0e+00
WP_032794852.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13990.0e+00
WP_030588756.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13990.0e+00
WP_217232108.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13980.0e+00
WP_073746108.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13960.0e+00
WP_030078611.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13960.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear