-- | --

IDSGR_438 TypeCDS
From472865 nt length885
To473749 aa length294
Gene pI9.84
Definitionputative ABC transporter permease protein M.W (Da)30671
Note AseI frg.F
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6355 putative multiple sugar ABC transporter permease protein3692.0e-103
coelSCO1900 putative integral membrane sugar transport protein4408.0e-125
samSAM23877_1974 putative integral membrane sugar transport protein3701.0e-130
kanCP970_33605 carbohydrate ABC transporter permease4332.0e-155
scabSCAB70341 putative ABC transporter permease protein3901.0e-109
saceSACE_4160 ABC sugar transporter, permease component2492.0e-67

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component107-27744.99.4e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030702070.1 carbohydrate ABC transporter permease [Streptomyces griseus] 10421.6e-140
NED08850.1 carbohydrate ABC transporter permease [Streptomyces sp. SID6648] 10384.4e-140
WP_097983695.1 carbohydrate ABC transporter permease [Streptomyces sp. f150... 10384.7e-140
WP_003964295.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 10386.6e-140
WP_030717587.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 10376.7e-140
WP_097972581.1 carbohydrate ABC transporter permease [Streptomyces sp. gb14... 10377.7e-140
WP_215103221.1 ABC transporter permease subunit [Streptomyces sp. McG3] >lc... 10369.0e-140
WP_032786424.1 MULTISPECIES: carbohydrate ABC transporter permease [unclass... 10369.4e-140
WP_161320134.1 carbohydrate ABC transporter permease [Streptomyces sp. SID5... 10369.4e-140
WP_010059202.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 10369.7e-140

PSORT result

LocalizationCertaintyPSORT said
Not Clear