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IDSGR_4527 TypeCDS
From5305960 nt length690
To5306649 aa length229
Gene pI5.99
Definitionconserved hypothetical protein M.W (Da)25002
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5067 putative sigma 54 modulation protein/ribosomal protein S30EA3461.0e-96
coelSCO3009 hypothetical protein3637.0e-102
samSAM23877_3047 Sigma 54 modulation protein/SSU ribosomal protein S30P3609.0e-129
kanCP970_26620 ribosome-associated translation inhibitor RaiA3548.0e-126
scabSCAB55331 3722.0e-104
saceSACE_6443 S30AE family protein1755.0e-45
nfarnfa46070 hypothetical protein1591.0e-40

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosom_S30AE_C1Sigma 54 modulation/S30EA ribosomal protein C terminus154-20777.15.3e-22

Ribosomal_S30AE1Sigma 54 modulation protein / S30EA ribosomal protein3-10070.71.2e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968752.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 11122.3e-153
WP_097867874.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 11096.2e-153
WP_097966542.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 11097.5e-153
WP_047176928.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 11097.5e-153
WP_103533270.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 11061.7e-152
WP_030089160.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 11044.1e-152
WP_093902983.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 11035.5e-152
WP_030594812.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 11011.2e-151
WP_018512285.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 11001.3e-151
WP_028418310.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 10957.7e-151

PSORT result

LocalizationCertaintyPSORT said
Not Clear