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IDSGR_4571 TypeCDS
From5371330 nt length972
To5372301 aa length323
Gene pI7.24
Definitionputative LysR-family transcriptional regulator M.W (Da)34775
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5113 putative LysR-family transcriptional regulator3616.0e-101
coelSCO2964 putative lysR-family transcriptional regulator3978.0e-112
samSAM23877_2999 putative lysR-family transcriptional regulator4069.0e-144
kanCP970_26880 LysR family transcriptional regulator4106.0e-145

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family9-6770.01.1e-19

LysR_substrate1LysR substrate binding domain107-29142.54.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968800.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 14070.0e+00
WP_012380701.1 LysR family transcriptional regulator [Streptomyces griseus]... 14070.0e+00
NEB53533.1 LysR family transcriptional regulator [Streptomyces griseus] 14030.0e+00
WP_202465047.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13550.0e+00
WP_202463016.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13530.0e+00
WP_203638438.1 LysR family transcriptional regulator [Streptomyces griseus] 13510.0e+00
WP_057663236.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13400.0e+00
WP_056707358.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13390.0e+00
WP_097956528.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13380.0e+00
WP_190008856.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13370.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear