-- | --

IDSGR_4753 TypeCDS
From5586810 nt length444
To5587253 aa length147
Gene pI5.68
Definitionputative transcriptional regulator M.W (Da)16646
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2012 putative transcriptional regulator1221.0e-29
coelSCO4391 conserved hypothetical protein1214.0e-29
samSAM23877_5956 Transcriptional regulator1252.0e-38
kanCP970_17730 transcriptional regulator1893.0e-63
scabSCAB62581 putative transcriptional regulator1052.0e-24
saceSACE_0812 transcriptional regulator, HxlR family1052.0e-24
nfarnfa54370 putative transcriptional regulator1082.0e-25

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HxlR1HxlR-like helix-turn-helix41-12897.23.3e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380838.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6812.6e-90
WP_003968998.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 6742.7e-89
WP_164361003.1 helix-turn-helix transcriptional regulator [Streptomyces gri... 6733.5e-89
WP_218527390.1 winged helix-turn-helix transcriptional regulator [Streptomy... 6631.4e-87
WP_137232886.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6586.7e-87
WP_103507833.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6552.5e-86
WP_193463266.1 helix-turn-helix transcriptional regulator [Streptomyces gri... 6542.7e-86
WP_164611701.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6527.0e-86
WP_219610128.1 winged helix-turn-helix transcriptional regulator [Streptomy... 6518.5e-86
WP_032785169.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 6501.0e-85

PSORT result

LocalizationCertaintyPSORT said
Not Clear