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IDSGR_4775 TypeCDS
From5612385 nt length852
To5611534 aa length283
Gene pI6.43
Definitionputative DNA-binding protein M.W (Da)30952
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5295 putative DNA-binding protein3379.0e-94
coelSCO2513 hypothetical protein1702.0e-43
samSAM23877_4764 putative DNA-binding protein1501.0e-44
kanCP970_29480 XRE family transcriptional regulator1681.0e-51
scabSCAB50501 1595.0e-40

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain6-5951.39.7e-14

HTH_31Helix-turn-helix9-5847.71.1e-12

HTH_191Helix-turn-helix domain6-5736.73e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380853.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14820.0e+00
NEB52706.1 helix-turn-helix transcriptional regulator [Streptomyces griseus] 14720.0e+00
WP_202463054.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14300.0e+00
WP_203638239.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14250.0e+00
WP_097955497.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13290.0e+00
WP_097911492.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13270.0e+00
WP_073216303.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13260.0e+00
WP_216325362.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13260.0e+00
NUV70060.1 helix-turn-helix transcriptional regulator [Streptomyces sp. CAI-... 13250.0e+00
WP_210936022.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13240.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear