| ID | SGR_4924
| Type | CDS
|
| From | 5801454
| nt length | 684
|
| To | 5802137
| aa length | 227
|
| Gene | clpP2
| pI | 4.91
|
| Definition | putative ATP-dependent Clp protease proteolytic subunit 2
| M.W (Da) | 24770
|
| Note |
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5448 putative ATP-dependent Clp protease proteolytic subunit 2 | 349 | 2.0e-97
|
| coel | SCO2618 clpP2 ATP dependent Clp protease proteolytic subunit | 371 | 3.0e-104
|
| sam | SAM23877_2667 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine protease | 367 | 1.0e-131
|
| kan | CP970_28880 ATP-dependent Clp protease proteolytic subunit | 361 | 6.0e-129
|
| scab | SCAB59951 putative ATP-dependent Clp protease proteolytic subunit 2 | 367 | 5.0e-103
|
| sace | SACE_1361 ATP-dependent Clp protease proteolytic subunit 2 | 263 | 9.0e-72
|
| nfar | nfa13340 putative Clp protease proteolytic subunit | 255 | 2.0e-69
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CLP_protease | 1 | Clp protease | 38-218 | 253.7 | 8.6e-76
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
|
| 1141 | 7.1e-158 |
| NEB37041.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces sp. ...
| 1138 | 2.1e-157 |
| EHM29890.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces sp. ...
| 1129 | 4.4e-156 |
| NEB66539.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces fulv...
| 1128 | 8.0e-156 |
| ALU93808.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces glob...
| 1125 | 1.8e-155 |
| GFN03866.1 | ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces m...
| 1125 | 2.3e-155 |
| OKJ23751.1 | Clp protease [Streptomyces sp. CB00316]
| 1122 | 6.1e-155 |
| AGK77144.1 | ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces fu...
| 1125 | 6.2e-155 |
|
| 1121 | 7.3e-155 |
| MYT53051.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces sp. ...
| 1121 | 8.8e-155 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|