| ID | SGR_4927
| Type | CDS
|
| From | 5804838
| nt length | 2622
|
| To | 5807459
| aa length | 873
|
| Gene | valS
| pI | 5.01
|
| Definition | putative valyl tRNA synthetase
| M.W (Da) | 97238
|
| Note |
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5451 putative valyl-tRNA synthetase | 1533 | 0.0e+00
|
| coel | SCO2615 valS valyl tRNA synthetase | 1531 | 0.0e+00
|
| sam | SAM23877_2663 Valine--tRNA ligase | 1552 | 0.0e+00
|
| kan | CP970_28905 valine--tRNA ligase | 1560 | 0.0e+00
|
| scab | SCAB59981 putative valyl-tRNA synthetase | 1467 | 0.0e+00
|
| sace | SACE_1384 valyl-tRNA synthetase | 1214 | 0.0e+00
|
| nfar | nfa13480 putative valyl-tRNA synthetase | 1073 | 0.0e+00
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| tRNA-synt_1 | 1 | tRNA synthetases class I (I, L, M and V) | 28-567 | 647.8 | 1.2e-194
|
| Anticodon_1 | 1 | Anticodon-binding domain of tRNA | 612-755 | 128.2 | 2.3e-37
|
| tRNA-synt_1g | 2 | tRNA synthetases class I (M) | 56-202, 509-568 | 75.5 | 3e-21
|
| Val_tRNA-synt_C | 1 | Valyl tRNA synthetase tRNA binding arm | 806-870 | 61.8 | 5.2e-17
|
| tRNA-synt_1_2 | 1 | Leucyl-tRNA synthetase, Domain 2 | 254-308 | 35.5 | 6.2e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|