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IDSGR_503 TypeCDS
From584737 nt length600
To584138 aa length199
Gene pI7.26
Definitionputative transcriptional regulator M.W (Da)21777
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7138 putative regulatory protein2508.0e-68
coelSCO1200 putative regulatory protein2714.0e-74
samSAM23877_1281 putative regulatory protein2523.0e-87
kanCP970_39055 XRE family transcriptional regulator2707.0e-94
scabSCAB78701 putative regulatory protein2684.0e-73
saceSACE_6312 transcriptional regulator, XRE family with cupin sensor2591.0e-70
nfarnfa45130 hypothetical protein2613.0e-71

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix22-7652.43.7e-14

HTH_311Helix-turn-helix domain19-7652.63.9e-14

Cupin_21Cupin domain117-18348.64.4e-13

HTH_191Helix-turn-helix domain20-7737.02.4e-09

HTH_261Cro/C1-type HTH DNA-binding domain21-7735.58.9e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003964368.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 10054.1e-138
WP_065479637.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9984.8e-137
WP_047180196.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9942.4e-136
WP_097882836.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9933.1e-136
WP_030717436.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9933.2e-136
WP_215111795.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9923.8e-136
WP_010059114.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9909.6e-136
WP_097975626.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9901.0e-135
WP_007452684.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9891.2e-135
WP_199888728.1 helix-turn-helix domain-containing protein [Streptomyces bad... 9891.3e-135

PSORT result

LocalizationCertaintyPSORT said
Not Clear