-- | --

IDSGR_5069 TypeCDS
From5969955 nt length1734
To5968222 aa length577
Gene pI5.54
Definitionputative ABC transporter ATPase and permease component M.W (Da)62187
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5681 putative ABC transporter ATP-binding protein9350.0e+00
coelSCO2463 putative ABC transporter9960.0e+00
samSAM23877_2516 conserved membrane protein of unknown function9800.0e+00
kanCP970_29875 ABC transporter ATP-binding protein9910.0e+00
scabSCAB62521 putative ABC transporter ATP-binding protein9940.0e+00
nfarnfa2630 putative ABC transporter6960.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region18-288149.71.1e-43

ABC_tran1ABC transporter352-49889.62.3e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
NEB56052.1 ABC transporter ATP-binding protein [Streptomyces griseus] 25720.0e+00
WP_003969333.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 25720.0e+00
WP_093685418.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 25650.0e+00
MYR11664.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 25650.0e+00
WP_219206368.1 ATP-binding cassette domain-containing protein [Streptomyces... 25640.0e+00
WP_202476694.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 25430.0e+00
WP_202463813.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 25390.0e+00
WP_073867858.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 25380.0e+00
WP_202464942.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 25370.0e+00
WP_097921884.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 25370.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear