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IDSGR_5301 TypeCDS
From6245505 nt length663
To6244843 aa length220
Gene pI10.24
Definitionputative transcriptional regulator M.W (Da)23424
Note AseI frg.H
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5994 putative regulatory protein2314.0e-62
coelSCO2213 putative regulatory protein2483.0e-67
samSAM23877_2302 Regulatory protein2436.0e-83
kanCP970_31460 winged helix family transcriptional regulator2564.0e-88
scabSCAB66781 putative regulatory protein2523.0e-68

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Trans_reg_C1Transcriptional regulatory protein, C terminal146-21782.41.7e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_219206704.1 winged helix-turn-helix domain-containing protein, partial [... 8623.8e-116
WP_003969574.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 8664.0e-116
WP_030080796.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 7789.6e-103
WP_164616212.1 winged helix-turn-helix domain-containing protein [Streptomy... 7761.6e-102
WP_069755016.1 winged helix-turn-helix domain-containing protein [Streptomy... 7744.4e-102
WP_137232772.1 winged helix-turn-helix domain-containing protein [Streptomy... 7734.8e-102
WP_218527786.1 winged helix-turn-helix domain-containing protein [Streptomy... 7692.3e-101
WP_073741879.1 winged helix-turn-helix domain-containing protein [Streptomy... 7483.4e-98
WP_210933181.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 7484.2e-98
WP_047176273.1 winged helix-turn-helix domain-containing protein [Streptomy... 7422.8e-97

PSORT result

LocalizationCertaintyPSORT said
Not Clear