| ID | SGR_5319
| Type | CDS
|
| From | 6261246
| nt length | 981
|
| To | 6260266
| aa length | 326
|
| Gene | lipA
| pI | 5.35
|
| Definition | putative lipoic acid synthetase
| M.W (Da) | 36416
|
| Note |
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6009 putative lipoic acid synthetase | 571 | 4.0e-164
|
| coel | SCO2194 putative lipoic acid synthetase | 575 | 4.0e-165
|
| sam | SAM23877_2289 lipoate synthase | 581 | 0.0e+00
|
| kan | CP970_31660 lipoyl synthase | 598 | 0.0e+00
|
| scab | SCAB66921 putative lipoic acid synthetase | 584 | 6.0e-168
|
| sace | SACE_1626 putative lipoic acid synthetase | 498 | 3.0e-142
|
| nfar | nfa16860 putative lipoic acid synthetase | 506 | 1.0e-144
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Radical_SAM | 1 | Radical SAM superfamily | 82-241 | 47.8 | 1.8e-12
|
| LIAS_N | 1 | N-terminal domain of lipoyl synthase of Radical_SAM family | 24-61 | 29.1 | 9.4e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|