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IDSGR_5355 TypeCDS
From6303157 nt length1254
To6304410 aa length417
GenelppS pI6.61
Definitionputative secreted protein M.W (Da)44333
Note AseI frg.H
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6050 putative lipoprotein5586.0e-160
coelSCO2153 putative secreted protein5792.0e-166
samSAM23877_2249 Secreted protein5750.0e+00
kanCP970_31890 L%2CD-transpeptidase5970.0e+00
scabSCAB67321 putative lipoprotein5402.0e-154
saceSACE_1291 ErfK/YbiS/YcfS/YnhG2287.0e-61
nfarnfa12820 hypothetical protein2088.0e-55

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain245-36662.74.4e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
SEE56458.1 Lipoprotein-anchoring transpeptidase ErfK/SrfK [Streptomyces gri... 21290.0e+00
WP_012381265.1 MULTISPECIES: Ig-like domain-containing protein [Streptomyce... 21280.0e+00
EGE44979.1 ErfK/YbiS/YcfS/YnhG family protein [Streptomyces sp. ACT-1] >emb 21260.0e+00
WP_030700907.1 MULTISPECIES: Ig-like domain-containing protein [Streptomyce... 21250.0e+00
WP_097964469.1 MULTISPECIES: Ig-like domain-containing protein [Streptomyce... 20880.0e+00
WP_219609613.1 Ig-like domain-containing protein [Streptomyces anulatus] >g... 20840.0e+00
EHM28514.1 putative secreted protein [Streptomyces sp. W007] 20830.0e+00
WP_032791810.1 Ig-like domain-containing protein [Streptomyces sp. W007] 20830.0e+00
WP_097911055.1 MULTISPECIES: Ig-like domain-containing protein [unclassifie... 20810.0e+00
WP_073868271.1 Ig-like domain-containing protein [Streptomyces sp. CB00072]... 20760.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear