-- | --

IDSGR_5522 TypeCDS
From6489135 nt length930
To6488206 aa length309
GenelivH2 pI8.39
Definitionputative branched chain amino acid ABC transporter permease protein M.W (Da)32360
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6223 putative branched-chain amino acid ABC transporter permease protein3748.0e-105
coelSCO2009 putative branched chain amino acid transport permease4453.0e-126
samSAM23877_2093 leucine/isoleucine/valine transporter subunit%2C membrane component of ABC superfamily4271.0e-152
kanCP970_32755 branched-chain amino acid ABC transporter permease4287.0e-153
scabSCAB68921 putative branched-chain amino acid ABC transporter permease protein4294.0e-121
saceSACE_4883 ABC transporter permease protein1502.0e-37
nfarnfa18720 putative branched-chain amino acid transporter permease protein1486.0e-37

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_21Branched-chain amino acid transport system / permease component8-293162.69.4e-48

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003969814.1 MULTISPECIES: branched-chain amino acid ABC transporter perm... 14460.0e+00
WP_047176092.1 MULTISPECIES: branched-chain amino acid ABC transporter perm... 14440.0e+00
WP_007460239.1 branched-chain amino acid ABC transporter permease [Streptom... 14430.0e+00
WP_073802046.1 MULTISPECIES: branched-chain amino acid ABC transporter perm... 14410.0e+00
WP_215110593.1 branched-chain amino acid ABC transporter permease [Streptom... 14390.0e+00
WP_097869454.1 branched-chain amino acid ABC transporter permease [Streptom... 14370.0e+00
WP_030079604.1 MULTISPECIES: branched-chain amino acid ABC transporter perm... 14370.0e+00
WP_097916037.1 branched-chain amino acid ABC transporter permease [Streptom... 14360.0e+00
WP_018957578.1 MULTISPECIES: branched-chain amino acid ABC transporter perm... 14320.0e+00
WP_205085472.1 branched-chain amino acid ABC transporter permease [Streptom... 14320.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear