| ID | SGR_5527
| Type | CDS
|
| From | 6494817
| nt length | 2712
|
| To | 6497528
| aa length | 903
|
| Gene | polA1
| pI | 4.78
|
| Definition | putative DNA polymerase I
| M.W (Da) | 98551
|
| Note |
| AseI frg. | H
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6227 putative DNA polymerase I | 1391 | 0.0e+00
|
| coel | SCO2003 DNA polymerase I | 1483 | 0.0e+00
|
| sam | SAM23877_2087 DNA polymerase I | 1435 | 0.0e+00
|
| kan | CP970_32785 DNA polymerase I | 1519 | 0.0e+00
|
| scab | SCAB68981 putative DNA polymerase I | 1523 | 0.0e+00
|
| sace | SACE_5437 DNA polymerase I | 1025 | 0.0e+00
|
| nfar | nfa18750 putative DNA polymerase I | 1065 | 0.0e+00
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DNA_pol_A | 1 | DNA polymerase family A | 525-899 | 479.1 | 8.1e-144
|
| 5_3_exonuc_N | 1 | 5'-3' exonuclease, N-terminal resolvase-like domain | 15-183 | 183.5 | 2.3e-54
|
| 5_3_exonuc | 1 | 5'-3' exonuclease, C-terminal SAM fold | 185-277 | 92.3 | 2e-26
|
| DNA_pol_A_exo1 | 1 | 3'-5' exonuclease | 367-450 | 25.5 | 8.6e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|