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IDSGR_5883 TypeCDS
From6886846 nt length753
To6886094 aa length250
Gene pI5.36
Definitionputative membrane protein M.W (Da)26306
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6583 putative membrane protein1186.0e-28
coelSCO0633 putative membrane protein2631.0e-71
samSAM23877_1777 hypothetical protein1072.0e-28
kanCP970_19535 anti-sigma factor2401.0e-80
scabSCAB10881 2763.0e-75

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RskA1Anti-sigma-K factor rskA58-243125.72.2e-36

zf-HC21Putative zinc-finger11-3726.74.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970190.1 MULTISPECIES: anti-sigma factor [Streptomyces] >gb 9862.0e-133
WP_012381585.1 MULTISPECIES: anti-sigma factor [Streptomyces] >lcl 9852.7e-133
WP_097878181.1 anti-sigma factor [Streptomyces sp. ms184] 9262.5e-124
WP_217229345.1 anti-sigma factor [Streptomyces anulatus] 9253.6e-124
NDZ60347.1 anti-sigma factor [Streptomyces anulatus] >gb 9236.1e-124
WP_097964280.1 anti-sigma factor [Streptomyces sp. or20] 9211.5e-123
WP_087767041.1 anti-sigma factor [Streptomyces sp. CS057] >gb 9201.8e-123
WP_093813594.1 MULTISPECIES: anti-sigma factor [Streptomyces] >gb 9202.0e-123
WP_219609150.1 anti-sigma factor [Streptomyces anulatus] >gb 9192.4e-123
WP_097916438.1 MULTISPECIES: anti-sigma factor [unclassified Streptomyces] 9192.6e-123

PSORT result

LocalizationCertaintyPSORT said
Not Clear