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IDSGR_5891 TypeCDS
From6893234 nt length2622
To6895855 aa length873
GeneopuAB pI4.96
Definitionputative glycine betaine ABC transporter substrate-binding and permease component M.W (Da)95870
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6716 putative glycine betaine ABC transport system permease protein11470.0e+00
coelSCO1620 opuABC glycine betaine transport system permease protein12010.0e+00
samSAM23877_1675 Glycine/betaine ABC transporter permease12110.0e+00
kanCP970_35605 ABC transporter permease subunit11550.0e+00
saceSACE_2224 glycine betaine transport system permease protein2973.0e-81

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC2Substrate binding domain of ABC-type glycine betaine transport system338-586, 615-862417.91.4e-125

BPD_transp_11Binding-protein-dependent transport system inner membrane component105-26173.21.9e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381591.1 ABC transporter permease/substrate binding protein [Streptom... 41840.0e+00
WP_030704567.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 41780.0e+00
WP_003970198.1 ABC transporter permease/substrate binding protein [Streptom... 41750.0e+00
WP_217230063.1 ABC transporter permease subunit [Streptomyces anulatus] 41390.0e+00
WP_097964274.1 ABC transporter permease/substrate binding protein [Streptom... 41210.0e+00
WP_056703131.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 41080.0e+00
WP_190007243.1 ABC transporter permease/substrate binding protein [Streptom... 41080.0e+00
WP_069757318.1 ABC transporter permease/substrate binding protein [Streptom... 41060.0e+00
WP_007457996.1 MULTISPECIES: ABC transporter permease/substrate binding pro... 41050.0e+00
WP_047175798.1 ABC transporter permease/substrate binding protein [Streptom... 41050.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear