| ID | SGR_5979
| Type | CDS
|
| From | 6991318
| nt length | 669
|
| To | 6991986
| aa length | 222
|
| Gene |
| pI | 9.91
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 23296
|
| Note |
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6790 putative ABC transporter permease protein | 227 | 1.0e-60
|
| coel | SCO1558 putative ABC transporter permease protein | 244 | 5.0e-66
|
| sam | SAM23877_1613 DL-methionine transporter subunit%2C membrane component protein of ABC superfamily | 272 | 1.0e-93
|
| kan | CP970_36005 ABC transporter permease | 280 | 1.0e-96
|
| scab | SCAB74411 putative ABC transporter permease protein | 277 | 1.0e-75
|
| sace | SACE_0805 putative ABC transport system permease protein | 129 | 2.0e-31
|
| nfar | nfa44100 putative ABC transporter permease protein | 109 | 2.0e-25
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 32-218 | 76.8 | 1.5e-21
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_003970290.1 | MULTISPECIES: ABC transporter permease [Streptomyces] >gb
| 778 | 1.1e-102 |
| WP_215110159.1 | ABC transporter permease subunit [Streptomyces sp. McG3] >lc...
| 773 | 6.7e-102 |
| WP_050359419.1 | MULTISPECIES: ABC transporter permease [Streptomyces] >gb
| 762 | 2.6e-100 |
| WP_097914910.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 757 | 1.4e-99 |
| WP_073870503.1 | ABC transporter permease [Streptomyces sp. CB00072] >gb
| 755 | 3.2e-99 |
| WP_097936831.1 | MULTISPECIES: ABC transporter permease [Streptomyces]
| 754 | 4.0e-99 |
| WP_030088464.1 | MULTISPECIES: ABC transporter permease [Streptomyces] >lcl
| 754 | 4.1e-99 |
|
| 753 | 5.5e-99 |
| WP_073745294.1 | ABC transporter permease [Streptomyces sp. CB02115] >gb
| 753 | 5.9e-99 |
| WP_007445892.1 | ABC transporter permease [Streptomyces sp. W007] >gb
| 750 | 1.8e-98 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|