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IDSGR_6016 TypeCDS
From7032922 nt length627
To7033548 aa length208
GeneruvA pI5.26
Definitionputative Holliday junction DNA helicase subunit B M.W (Da)21332
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6834 putative Holliday junction DNA helicase subunit B2522.0e-68
coelSCO1519 ruvA holliday junction DNA helicase3191.0e-88
samSAM23877_1570 Holliday junction ATP-dependent DNA helicase RuvA3215.0e-114
kanCP970_36255 Holliday junction branch migration protein RuvA3103.0e-109
scabSCAB74881 putative Holliday junction DNA helicase subunit B2854.0e-78
saceSACE_2022 Holliday junction DNA helicase1554.0e-39
nfarnfa36960 putative Holliday junction DNA helicase B subunit1484.0e-37

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RuvA_N1RuvA N terminal domain1-6166.12e-18

HHH_51Helix-hairpin-helix domain71-12955.65.5e-15

RuvA_C1RuvA, C-terminal domain152-20439.84.2e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970329.1 MULTISPECIES: Holliday junction branch migration protein Ruv... 9215.2e-125
WP_089114585.1 MULTISPECIES: Holliday junction branch migration protein Ruv... 9163.6e-124
WP_219206670.1 Holliday junction branch migration protein RuvA [Streptomyce... 9163.8e-124
WP_126932276.1 MULTISPECIES: Holliday junction branch migration protein Ruv... 9154.3e-124
WP_032787965.1 Holliday junction branch migration protein RuvA [Streptomyce... 9154.6e-124
WP_010057292.1 MULTISPECIES: Holliday junction branch migration protein Ruv... 9146.0e-124
WP_161322708.1 Holliday junction branch migration protein RuvA [Streptomyce... 9146.7e-124
WP_097992052.1 Holliday junction branch migration protein RuvA [Streptomyce... 9138.7e-124
WP_218526751.1 Holliday junction branch migration protein RuvA [Streptomyce... 9139.4e-124
WP_200741813.1 Holliday junction branch migration protein RuvA [Streptomyce... 9121.3e-123

PSORT result

LocalizationCertaintyPSORT said
Not Clear