-- | --

IDSGR_6017 TypeCDS
From7033579 nt length1086
To7034664 aa length361
GeneruvB pI4.84
Definitionputative Holliday junction DNA helicase subunit A M.W (Da)38513
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6835 putative Holliday junction DNA helicase subunit A5492.0e-157
coelSCO1518 ruvB holliday junction DNA helicase5783.0e-166
samSAM23877_1569 ATP-dependent DNA helicase%2C component of RuvABC resolvasome6050.0e+00
kanCP970_36260 Holliday junction branch migration DNA helicase RuvB5920.0e+00
scabSCAB74891 putative Holliday junction DNA helicase subunit A5816.0e-167
saceSACE_2023 Holliday junction DNA helicase RuvB4563.0e-129
nfarnfa36950 putative Holliday junction DNA helicase A subunit4616.0e-131

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RuvB_N1Holliday junction DNA helicase ruvB N-terminus22-253363.04.8e-109

RuvB_C1Holliday junction DNA helicase ruvB C-terminus271-344100.62.9e-29

AAA1ATPase family associated with various cellular activities (AAA)73-19158.77.3e-16

AAA_51AAA domain (dynein-related subfamily)72-19037.02.7e-09

TIP491TIP49 C-terminus42-10024.51.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970330.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15950.0e+00
WP_093684296.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15910.0e+00
WP_215105031.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15900.0e+00
WP_217225874.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15860.0e+00
WP_218526752.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15860.0e+00
WP_137232284.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15860.0e+00
WP_097968205.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15850.0e+00
WP_073805931.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15830.0e+00
WP_200720706.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15820.0e+00
WP_030633286.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15810.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear