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IDSGR_6030 TypeCDS
From7049441 nt length615
To7050055 aa length204
GenerpsD pI10.52
Definitionputative 30S ribosomal protein S4 M.W (Da)23359
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6847 putative ribosomal protein S43182.0e-88
coelSCO1505 30S ribosomal protein S43692.0e-103
samSAM23877_1557 30S ribosomal protein S43718.0e-134
kanCP970_36340 30S ribosomal protein S43795.0e-137
scabSCAB75031 putative ribosomal protein S43738.0e-105
saceSACE_6804 30S ribosomal protein S41483.0e-37
nfarnfa8360 putative ribosomal protein S41674.0e-43

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S41Ribosomal protein S4/S9 N-terminal domain6-9174.31e-20

S41S4 domain92-13961.44.5e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970343.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >sp 10578.6e-146
WP_018524225.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >gb 10551.5e-145
WP_007457953.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >gb 10542.0e-145
WP_205082969.1 30S ribosomal protein S4 [Streptomyces sp. RHZ10] >lcl 10542.3e-145
WP_124267348.1 30S ribosomal protein S4 [Streptomyces sp. ADI96-02] >gb 10542.7e-145
WP_069173264.1 30S ribosomal protein S4 [Streptomyces griseus] 10532.8e-145
WP_015607373.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomyces] >lcl 10533.4e-145
WP_093709707.1 30S ribosomal protein S4 [Streptomyces sp. 2131.1] >emb 10533.5e-145
WP_006123201.1 MULTISPECIES: 30S ribosomal protein S4 [Streptomycetaceae] >... 10533.8e-145
WP_073729460.1 30S ribosomal protein S4 [Streptomyces sp. TSRI0281] >gb 10524.0e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear