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IDSGR_6044 TypeCDS
From7065511 nt length432
To7065942 aa length143
GenenusB pI4.43
Definitionputative NusB-family protein M.W (Da)16295
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6860 putative transcription termination protein2135.0e-57
coelSCO1490 putative NusB-family protein2299.0e-62
samSAM23877_1542 N utilization substance protein B-like protein2279.0e-79
kanCP970_36415 transcription antitermination factor NusB2372.0e-82
scabSCAB75161 putative transcription termination protein2282.0e-61
saceSACE_2076 NusB antitermination factor1391.0e-34
nfarnfa36310 putative transcription termination factor1204.0e-29

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NusB1NusB family6-133118.32.4e-34

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970357.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7383.8e-99
WP_219206678.1 transcription antitermination factor NusB [Streptomyces gris... 7366.3e-99
WP_030704435.1 transcription antitermination factor NusB [Streptomyces gris... 7332.2e-98
WP_185301920.1 transcription antitermination factor NusB [Streptomyces finl... 7313.7e-98
WP_007453233.1 MULTISPECIES: transcription antitermination factor NusB [unc... 7306.5e-98
WP_056787023.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7306.6e-98
WP_050359374.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7281.2e-97
WP_073751719.1 MULTISPECIES: transcription antitermination factor NusB [unc... 7271.5e-97
WP_097968313.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7271.6e-97
WP_031097763.1 MULTISPECIES: transcription antitermination factor NusB [Str... 7271.9e-97

PSORT result

LocalizationCertaintyPSORT said
Not Clear