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IDSGR_6244 TypeCDS
From7420703 nt length573
To7421275 aa length190
Gene pI5.58
Definitionputative transcriptional regulator M.W (Da)20082
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7041 putative transcriptional regulatory protein2514.0e-68
coelSCO1312 putative transcriptional regulatory protein2652.0e-72
samSAM23877_1387 putative transcriptional regulatory protein2697.0e-94
kanCP970_37830 XRE family transcriptional regulator3012.0e-106
scabSCAB77741 putative transcriptional regulatory protein2545.0e-69
saceSACE_2132 transcriptional regulator, Cro/CI family1153.0e-27

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cupin_21Cupin domain116-18254.18.3e-15

HTH_311Helix-turn-helix domain11-6547.51.6e-12

HTH_31Helix-turn-helix15-6847.21.6e-12

HTH_191Helix-turn-helix domain13-7345.36e-12

AraC_binding1AraC-like ligand binding domain125-18030.62.4e-07

HTH_261Cro/C1-type HTH DNA-binding domain14-7323.35.9e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003970562.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 9741.2e-133
WP_215104941.1 cupin domain-containing protein [Streptomyces sp. McG3] >lcl... 9453.2e-129
WP_097869487.1 XRE family transcriptional regulator [Streptomyces sp. rh34] 9411.6e-128
WP_103535169.1 XRE family transcriptional regulator [Streptomyces sp. SM11] 9367.4e-128
WP_073224702.1 XRE family transcriptional regulator [Streptomyces sp. NBRC ... 9351.0e-127
WP_073804829.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 9341.6e-127
WP_007453767.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 9332.3e-127
WP_219608823.1 cupin domain-containing protein [Streptomyces anulatus] >gb 9323.1e-127
WP_216328075.1 cupin domain-containing protein [Streptomyces sp. YPW6] >gb 9313.7e-127
NDZ56754.1 helix-turn-helix domain-containing protein [Streptomyces anulatus... 9307.3e-127

PSORT result

LocalizationCertaintyPSORT said
Not Clear