ID	SGR_6823	Type	CDS
From	8206256	nt length	873
To	8205384	aa length	290
Gene		pI	4.9
Definition	putative RNA polymerase sigma factor	M.W (Da)	32030
Note		AseI frg.	G
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	235-284	64.1	5.6e-18
	Sigma70_r2	1	Sigma-70 region 2	65-135	58.2	4.8e-16
	Sigma70_r3	1	Sigma-70 region 3	145-207	50.9	1.1e-13
	Sigma70_r4_2	1	Sigma-70, region 4	235-281	29.0	5.7e-07

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_012382245.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1514	0.0e+00
WP_003971145.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1512	0.0e+00
WP_164360382.1	RNA polymerase sigma factor SigF [Streptomyces griseus] >gb	1504	0.0e+00
WP_151513051.1	RNA polymerase sigma factor SigF [Streptomyces sp. TRM68085]...	1295	2.6e-179
WP_210992910.1	RNA polymerase sigma factor SigF [Streptomyces sp. C3-3] >lc...	1286	7.2e-178
WP_069755606.1	RNA polymerase sigma factor SigF [Streptomyces sp. EN16]	1282	3.5e-177
WP_189432603.1	RNA polymerase sigma factor SigF [Streptomyces rubiginosohel...	1277	1.7e-176
WP_123529300.1	SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy...	1271	1.8e-175
WP_109981617.1	RNA polymerase sigma factor SigF [Streptomyces sp. CS090A] >...	1256	2.9e-173
WP_030337259.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1254	6.7e-173

PSORT result

Localization	Certainty	PSORT said
Not Clear

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